volocity program Search Results


volocity software  (Hamamatsu)
90
Hamamatsu volocity software
Volocity Software, supplied by Hamamatsu, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/volocity+program/pmc04214780-242-13-7?v=Hamamatsu
Average 90 stars, based on 1 article reviews
volocity software - by Bioz Stars, 2026-08
90/100 stars
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volocity software  (Revvity)
97
Revvity volocity software
Volocity Software, supplied by Revvity, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/volocity+program/bio_rxiv__2023__07__11__548570-107-5-7?v=Revvity
Average 97 stars, based on 1 article reviews
volocity software - by Bioz Stars, 2026-08
97/100 stars
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volocity  (Oxford Instruments)
99
Oxford Instruments volocity
Volocity, supplied by Oxford Instruments, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/volocity+program/pm28351758-65-4-6?v=Oxford+Instruments
Average 99 stars, based on 1 article reviews
volocity - by Bioz Stars, 2026-08
99/100 stars
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prism for windows (version: 9.5.1)  (GraphPad Software Inc)
90
GraphPad Software Inc prism for windows (version: 9.5.1)
Prism For Windows (Version: 9.5.1), supplied by GraphPad Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/volocity+program/pm38843837-218-42-55?v=GraphPad+Software+Inc
Average 90 stars, based on 1 article reviews
prism for windows (version: 9.5.1) - by Bioz Stars, 2026-08
90/100 stars
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volocity software perkin elmer graphpad prism v6 0 software graphpad  (Partek)
86
Partek volocity software perkin elmer graphpad prism v6 0 software graphpad
Volocity Software Perkin Elmer Graphpad Prism V6 0 Software Graphpad, supplied by Partek, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/volocity+program/pm31315031-173-214-245?v=Partek
Average 86 stars, based on 1 article reviews
volocity software perkin elmer graphpad prism v6 0 software graphpad - by Bioz Stars, 2026-08
86/100 stars
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volocity software  (Improvisions Inc)
90
Improvisions Inc volocity software
Volocity Software, supplied by Improvisions Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/volocity+program/pmc04326907-165-10-12?v=Improvisions+Inc
Average 90 stars, based on 1 article reviews
volocity software - by Bioz Stars, 2026-08
90/100 stars
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algorithms fiji nih  (Nikon)
99
Nikon algorithms fiji nih
Algorithms Fiji Nih, supplied by Nikon, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/volocity+program/pmc07225751__mmc7-326-115-130?v=Nikon
Average 99 stars, based on 1 article reviews
algorithms fiji nih - by Bioz Stars, 2026-08
99/100 stars
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improvision volocity software  (Hamamatsu)
90
Hamamatsu improvision volocity software
Improvision Volocity Software, supplied by Hamamatsu, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/volocity+program/pmc04397591-132-7-16?v=Hamamatsu
Average 90 stars, based on 1 article reviews
improvision volocity software - by Bioz Stars, 2026-08
90/100 stars
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volocity software  (InterFocus GmbH)
90
InterFocus GmbH volocity software
Timing of synapsis for autosomes. (A) Stacked bar graph indicating the percent of nuclei exhibiting the indicated patterns of SYP-1 localization associated with autosomes at each time point (in nuclei with S-phase labeled X chromosomes). For nuclei in the “short stretch” class [example shown in (B)], one or a few short stretches of SYP-1 were observed, together with a large SYP-1 aggregate not associated with chromosome axes; it is unclear whether such short stretches represent bona fide synapsis intermediates. The “<half” class comprises nuclei that lack a SYP-1 aggregate but have SYP-1 associated with less than half of the total length of the autosomal axes (marked by HTP-3 immunostaining). Numbers of gonads/nuclei scored as reported in Figure 2 legend. (B) Sample images from the analysis quantified in (A); images are maximum intensity projections generated in <t>Volocity</t> from 3-D image stacks (top, partial projection; bottom, full projection). Schematics in bottom left corner of DAPI panels indicate the portion of the nucleus included in the projection. Top, nucleus from the short-stretch category, showing two SYP-1 stretches that are clearly shorter than the length of a chromosome (↓), plus a large SYP-1 aggregate (*) that also contains (nonaxis-associated) HTP-3 protein. Bottom, characteristic image from the <half class. (C) Cumulative distribution event curves for autosomal synapsis, indicating that it takes ∼3–3.5 hr from the onset of autosomal synapsis until synapsis is complete (see text). Also plotted is the actual frequency (not cumulative distribution) of SYP-1 aggregates present at the indicated time points, which indicates that SYP-1 aggregates are present in essentially all leptotene nuclei, but disappear at or soon after the onset of synapsis. All error bars indicate 95% C.I. h, hours
Volocity Software, supplied by InterFocus GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/volocity+program/pmc05586365-75-7-0?v=InterFocus+GmbH
Average 90 stars, based on 1 article reviews
volocity software - by Bioz Stars, 2026-08
90/100 stars
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volocity 3-d image analysis software  (SciCrunch Inc)
90
SciCrunch Inc volocity 3-d image analysis software
Timing of synapsis for autosomes. (A) Stacked bar graph indicating the percent of nuclei exhibiting the indicated patterns of SYP-1 localization associated with autosomes at each time point (in nuclei with S-phase labeled X chromosomes). For nuclei in the “short stretch” class [example shown in (B)], one or a few short stretches of SYP-1 were observed, together with a large SYP-1 aggregate not associated with chromosome axes; it is unclear whether such short stretches represent bona fide synapsis intermediates. The “<half” class comprises nuclei that lack a SYP-1 aggregate but have SYP-1 associated with less than half of the total length of the autosomal axes (marked by HTP-3 immunostaining). Numbers of gonads/nuclei scored as reported in Figure 2 legend. (B) Sample images from the analysis quantified in (A); images are maximum intensity projections generated in <t>Volocity</t> from 3-D image stacks (top, partial projection; bottom, full projection). Schematics in bottom left corner of DAPI panels indicate the portion of the nucleus included in the projection. Top, nucleus from the short-stretch category, showing two SYP-1 stretches that are clearly shorter than the length of a chromosome (↓), plus a large SYP-1 aggregate (*) that also contains (nonaxis-associated) HTP-3 protein. Bottom, characteristic image from the <half class. (C) Cumulative distribution event curves for autosomal synapsis, indicating that it takes ∼3–3.5 hr from the onset of autosomal synapsis until synapsis is complete (see text). Also plotted is the actual frequency (not cumulative distribution) of SYP-1 aggregates present at the indicated time points, which indicates that SYP-1 aggregates are present in essentially all leptotene nuclei, but disappear at or soon after the onset of synapsis. All error bars indicate 95% C.I. h, hours
Volocity 3 D Image Analysis Software, supplied by SciCrunch Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/volocity+program/pm38150545-80-9-16?v=SciCrunch+Inc
Average 90 stars, based on 1 article reviews
volocity 3-d image analysis software - by Bioz Stars, 2026-08
90/100 stars
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digital camera c10600 orca-r2  (Hamamatsu)
90
Hamamatsu digital camera c10600 orca-r2
Timing of synapsis for autosomes. (A) Stacked bar graph indicating the percent of nuclei exhibiting the indicated patterns of SYP-1 localization associated with autosomes at each time point (in nuclei with S-phase labeled X chromosomes). For nuclei in the “short stretch” class [example shown in (B)], one or a few short stretches of SYP-1 were observed, together with a large SYP-1 aggregate not associated with chromosome axes; it is unclear whether such short stretches represent bona fide synapsis intermediates. The “<half” class comprises nuclei that lack a SYP-1 aggregate but have SYP-1 associated with less than half of the total length of the autosomal axes (marked by HTP-3 immunostaining). Numbers of gonads/nuclei scored as reported in Figure 2 legend. (B) Sample images from the analysis quantified in (A); images are maximum intensity projections generated in <t>Volocity</t> from 3-D image stacks (top, partial projection; bottom, full projection). Schematics in bottom left corner of DAPI panels indicate the portion of the nucleus included in the projection. Top, nucleus from the short-stretch category, showing two SYP-1 stretches that are clearly shorter than the length of a chromosome (↓), plus a large SYP-1 aggregate (*) that also contains (nonaxis-associated) HTP-3 protein. Bottom, characteristic image from the <half class. (C) Cumulative distribution event curves for autosomal synapsis, indicating that it takes ∼3–3.5 hr from the onset of autosomal synapsis until synapsis is complete (see text). Also plotted is the actual frequency (not cumulative distribution) of SYP-1 aggregates present at the indicated time points, which indicates that SYP-1 aggregates are present in essentially all leptotene nuclei, but disappear at or soon after the onset of synapsis. All error bars indicate 95% C.I. h, hours
Digital Camera C10600 Orca R2, supplied by Hamamatsu, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/volocity+program/pm39934414-221-5-17?v=Hamamatsu
Average 90 stars, based on 1 article reviews
digital camera c10600 orca-r2 - by Bioz Stars, 2026-08
90/100 stars
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volocity acquisition software  (Hamamatsu)
90
Hamamatsu volocity acquisition software
Timing of synapsis for autosomes. (A) Stacked bar graph indicating the percent of nuclei exhibiting the indicated patterns of SYP-1 localization associated with autosomes at each time point (in nuclei with S-phase labeled X chromosomes). For nuclei in the “short stretch” class [example shown in (B)], one or a few short stretches of SYP-1 were observed, together with a large SYP-1 aggregate not associated with chromosome axes; it is unclear whether such short stretches represent bona fide synapsis intermediates. The “<half” class comprises nuclei that lack a SYP-1 aggregate but have SYP-1 associated with less than half of the total length of the autosomal axes (marked by HTP-3 immunostaining). Numbers of gonads/nuclei scored as reported in Figure 2 legend. (B) Sample images from the analysis quantified in (A); images are maximum intensity projections generated in <t>Volocity</t> from 3-D image stacks (top, partial projection; bottom, full projection). Schematics in bottom left corner of DAPI panels indicate the portion of the nucleus included in the projection. Top, nucleus from the short-stretch category, showing two SYP-1 stretches that are clearly shorter than the length of a chromosome (↓), plus a large SYP-1 aggregate (*) that also contains (nonaxis-associated) HTP-3 protein. Bottom, characteristic image from the <half class. (C) Cumulative distribution event curves for autosomal synapsis, indicating that it takes ∼3–3.5 hr from the onset of autosomal synapsis until synapsis is complete (see text). Also plotted is the actual frequency (not cumulative distribution) of SYP-1 aggregates present at the indicated time points, which indicates that SYP-1 aggregates are present in essentially all leptotene nuclei, but disappear at or soon after the onset of synapsis. All error bars indicate 95% C.I. h, hours
Volocity Acquisition Software, supplied by Hamamatsu, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/volocity+program/pm25666808-367-11-8?v=Hamamatsu
Average 90 stars, based on 1 article reviews
volocity acquisition software - by Bioz Stars, 2026-08
90/100 stars
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Image Search Results


Timing of synapsis for autosomes. (A) Stacked bar graph indicating the percent of nuclei exhibiting the indicated patterns of SYP-1 localization associated with autosomes at each time point (in nuclei with S-phase labeled X chromosomes). For nuclei in the “short stretch” class [example shown in (B)], one or a few short stretches of SYP-1 were observed, together with a large SYP-1 aggregate not associated with chromosome axes; it is unclear whether such short stretches represent bona fide synapsis intermediates. The “<half” class comprises nuclei that lack a SYP-1 aggregate but have SYP-1 associated with less than half of the total length of the autosomal axes (marked by HTP-3 immunostaining). Numbers of gonads/nuclei scored as reported in Figure 2 legend. (B) Sample images from the analysis quantified in (A); images are maximum intensity projections generated in Volocity from 3-D image stacks (top, partial projection; bottom, full projection). Schematics in bottom left corner of DAPI panels indicate the portion of the nucleus included in the projection. Top, nucleus from the short-stretch category, showing two SYP-1 stretches that are clearly shorter than the length of a chromosome (↓), plus a large SYP-1 aggregate (*) that also contains (nonaxis-associated) HTP-3 protein. Bottom, characteristic image from the <half class. (C) Cumulative distribution event curves for autosomal synapsis, indicating that it takes ∼3–3.5 hr from the onset of autosomal synapsis until synapsis is complete (see text). Also plotted is the actual frequency (not cumulative distribution) of SYP-1 aggregates present at the indicated time points, which indicates that SYP-1 aggregates are present in essentially all leptotene nuclei, but disappear at or soon after the onset of synapsis. All error bars indicate 95% C.I. h, hours

Journal: Genetics

Article Title: Time-Course Analysis of Early Meiotic Prophase Events Informs Mechanisms of Homolog Pairing and Synapsis in Caenorhabditis elegans

doi: 10.1534/genetics.117.204172

Figure Lengend Snippet: Timing of synapsis for autosomes. (A) Stacked bar graph indicating the percent of nuclei exhibiting the indicated patterns of SYP-1 localization associated with autosomes at each time point (in nuclei with S-phase labeled X chromosomes). For nuclei in the “short stretch” class [example shown in (B)], one or a few short stretches of SYP-1 were observed, together with a large SYP-1 aggregate not associated with chromosome axes; it is unclear whether such short stretches represent bona fide synapsis intermediates. The “

Article Snippet: Interfocus distances reported in were measured using Volocity software. fig ft0 fig mode=article f1 fig/graphic|fig/alternatives/graphic mode="anchored" m1 Open in a separate window caption a7 Distinct organization of DAPI-stained chromatin during early meiotic prophase substages allows alignment of data from different experiments. (A–D) Left: immunofluorescence images of individual nuclei stained for DNA (DAPI); meiotic chromosome axis protein HTP-3; and SC central-region protein SYP-1, illustrating the DAPI organization features used to identify and define the indicated substages.

Techniques: Labeling, Immunostaining, Generated

Timing of X-chromosome synapsis. (A) Stacked bar graph indicating the percent of nuclei exhibiting the indicated patterns of SYP-1 localization associated with the X-chromosome pair at each time point. In the dot class, the only SYP-1 associated with the X chromosomes is a small dot that has clearly not been extended at all [example shown in (E)]; nuclei with any elongated SYP-1 stretch up to half the length of a chromosome pair comprise the “<half” class. Numbers of gonads/nuclei scored as reported in Figure 2 legend. (B) Cumulative distribution curves for X-chromosome synapsis (±95% C.I.). (C) Two-by-two contingency table depicting the incidence of fully synapsed autosomes relative to fully synapsed X chromosomes at the 5-hr postinjection time point, when essentially all of the nuclei were in the midzygotene stage. X chromosomes exhibiting complete synapsis were substantially underrepresented relative to autosomes (P < 0.0001, two-tailed Fisher exact test). (D) Image panel depicting a leptotene nucleus 4 hr postinjection with S-phase labeled X chromosomes, immunostained for axis protein HTP-3. Whereas HTP-3 is associated with all autosomes in this nucleus, HTP-3 is not yet detected on the X chromosomes, suggesting that axis assembly on the X chromosomes is delayed relative to autosomal axis assembly. (E) Image panel of a zygotene nucleus from a “shadow time point” 8.5 hr postinjection, in which S-phase label had been incorporated into all autosomes during early S phase but not into the HIM-8-marked X chromosomes (as label had been depleted prior to the start of X replication). Whereas there is extensive SYP-1 associated with the autosomes in this nucleus, only a tiny SYP-1 dot is detected on the X (arrow). This image panel illustrates that later timing of SC assembly on the X chromosomes (relative to the autosomes) is not an experimental artifact resulting from incorporation of labeled nucleotides into the DNA. Images in (D and E) are from Volocity volume renderings of 3-D data stacks encompassing whole nuclei. Blue outlines indicate the X chromosomes; dNTP* indicates labeled nucleotides. h, hours; org., organization.

Journal: Genetics

Article Title: Time-Course Analysis of Early Meiotic Prophase Events Informs Mechanisms of Homolog Pairing and Synapsis in Caenorhabditis elegans

doi: 10.1534/genetics.117.204172

Figure Lengend Snippet: Timing of X-chromosome synapsis. (A) Stacked bar graph indicating the percent of nuclei exhibiting the indicated patterns of SYP-1 localization associated with the X-chromosome pair at each time point. In the dot class, the only SYP-1 associated with the X chromosomes is a small dot that has clearly not been extended at all [example shown in (E)]; nuclei with any elongated SYP-1 stretch up to half the length of a chromosome pair comprise the “

Article Snippet: Interfocus distances reported in were measured using Volocity software. fig ft0 fig mode=article f1 fig/graphic|fig/alternatives/graphic mode="anchored" m1 Open in a separate window caption a7 Distinct organization of DAPI-stained chromatin during early meiotic prophase substages allows alignment of data from different experiments. (A–D) Left: immunofluorescence images of individual nuclei stained for DNA (DAPI); meiotic chromosome axis protein HTP-3; and SC central-region protein SYP-1, illustrating the DAPI organization features used to identify and define the indicated substages.

Techniques: Two Tailed Test, Labeling